Hi @Jigoe13
1) You can bring in your input files in a workflow with 2 separate Input Data tools.
2) You can merge the data files together, prep the data, and clean up the data within the platform
3) You can then use an output tool to output the data to an excel file.
4) You can also configure an email tool (reporting category) with the proper SMTP settings, attach the excel file as an attachment and then run the workflow to send out the email.
https://help.alteryx.com/20223/designer/email-tool
Hope this helps.