Im tryin to install the rpy2 package and cant get past a "The system cannot find the file specified". Im not sure what file it cant find or why it isnt able to install, (it is downloading the tar.gz file but wont install into the env)
Any help would be great
Collecting rpy2
Using cached rpy2-3.3.6.tar.gz (179 kB)
ERROR: Command errored out with exit status 1:
command: 'c:\program files\alteryx\bin\miniconda3\envs\jupytertool_venv\python.exe' -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'C:\\Users\\paulj\\AppData\\Local\\Temp\\pip-install-ih4008f_\\rpy2\\setup.py'"'"'; __file__='"'"'C:\\Users\\paulj\\AppData\\Local\\Temp\\pip-install-ih4008f_\\rpy2\\setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' egg_info --egg-base 'C:\Users\paulj\AppData\Local\Temp\pip-pip-egg-info-47z8bowi'
cwd: C:\Users\paulj\AppData\Local\Temp\pip-install-ih4008f_\rpy2\
Complete output (20 lines):
cffi mode: CFFI_MODE.ANY
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "C:\Users\paulj\AppData\Local\Temp\pip-install-ih4008f_\rpy2\setup.py", line 115, in <module>
c_extension_status = get_r_c_extension_status()
File "C:\Users\paulj\AppData\Local\Temp\pip-install-ih4008f_\rpy2\setup.py", line 99, in get_r_c_extension_status
*situation.get_r_flags(r_home, '--ldflags')
File "C:\Users\paulj\AppData\Local\Temp\pip-install-ih4008f_\rpy2\rpy2\situation.py", line 210, in get_r_flags
allow_empty=False)))
File "C:\Users\paulj\AppData\Local\Temp\pip-install-ih4008f_\rpy2\rpy2\situation.py", line 179, in _get_r_cmd_config
universal_newlines=True
File "c:\program files\alteryx\bin\miniconda3\envs\jupytertool_venv\lib\subprocess.py", line 356, in check_output
**kwargs).stdout
File "c:\program files\alteryx\bin\miniconda3\envs\jupytertool_venv\lib\subprocess.py", line 423, in run
with Popen(*popenargs, **kwargs) as process:
File "c:\program files\alteryx\bin\miniconda3\envs\jupytertool_venv\lib\subprocess.py", line 729, in __init__
restore_signals, start_new_session)
File "c:\program files\alteryx\bin\miniconda3\envs\jupytertool_venv\lib\subprocess.py", line 1017, in _execute_child
startupinfo)
FileNotFoundError: [WinError 2] The system cannot find the file specified
Based on the comment from Python package install failing - Stack Overflow (I duplicate posted) It sounds like the issue is actually associated with a lack of a windows build for the rpy2 package.
I need to test installing from an alternative mirror as mention in the package GitHub issues page Can't install rpy2 · Issue #390 · rpy2/rpy2 · GitHub

