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Problem: The visual nature of Alteryx is one of its key selling points. The idea is to make work flows understandable. But when you're building something complicated, the lines cease being a helpful visualization and become a confusing mess instead. Lines cross each other. Lines cross out annotations. I know that there's wireless connections, but using too many of those makes the data flow hard to trace. So I spend time moving tools and boxes around, trying to get lines to cooperate, instead of chasing that thrill of solving.
Solution: Users should be able to click the line and place an anchor which affects the line just like a tool would, but without doing anything to the data. It would just be a little point, not a full tool. That way I could make the lines dodge my annotations without placing needless select tools or moving everything around. It could be located in the Documentation tab.