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Alteryx 2020.1 uses R version 3.5.3 and 2020.2 uses 3.6.3 and from one to another the R library that produces scatterplot (CAR) got updated.
The weirdest thing was the scatterplot R function to work when using categorical non-binary variables.
But from the scatterplot tool itself, it has a note letting us know that Y field should be continuous or binary categorical, so you were lucky before. I can't go any further in my analysis to elaborate my answer better as I'm not an R user.
I've attached a simple workflow with the R tool for you to run in 2020.1 and 2020.2 version if you like.