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Scheduling and automation are controlled via Alteryx Server. Server also allows for command line or API control of workflows. Some companies have leveraged a small batch script running on a frequent schedule to look for a file and then execute a workflow on the Server as this is more efficient compared to scheduling a workflow on server on a more frequent basis.
Alteryx Server would be great for this use case because you can create an analytic app that can be run by someone who is not technical. Do you know who the account executive is that assisted you with your original purchase? They will be able to assist you with server evaluation/purchase questions.